CDS

Accession Number TCMCG017C22675
gbkey CDS
Protein Id OMO77756.1
Location join(34209..34273,34580..34646,34823..35030,35274..35443,35792..35869,35957..36089,36886..36967,37105..37162,37974..38030,38162..38233,38314..38346)
GeneID InterPro:IPR007188
Organism Corchorus olitorius
locus_tag COLO4_25012

Protein

Length 340aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01018898.1
Definition ARP2/3 complex, 34kDa subunit (p34-Arc) [Corchorus olitorius]
Locus_tag COLO4_25012

EGGNOG-MAPPER Annotation

COG_category Z
Description Functions as actin-binding component of the Arp2 3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
ko04812        [VIEW IN KEGG]
KEGG_ko ko:K05758        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04144        [VIEW IN KEGG]
ko04666        [VIEW IN KEGG]
ko04810        [VIEW IN KEGG]
ko05100        [VIEW IN KEGG]
ko05130        [VIEW IN KEGG]
ko05131        [VIEW IN KEGG]
ko05132        [VIEW IN KEGG]
map04144        [VIEW IN KEGG]
map04666        [VIEW IN KEGG]
map04810        [VIEW IN KEGG]
map05100        [VIEW IN KEGG]
map05130        [VIEW IN KEGG]
map05131        [VIEW IN KEGG]
map05132        [VIEW IN KEGG]
GOs GO:0000147        [VIEW IN EMBL-EBI]
GO:0000902        [VIEW IN EMBL-EBI]
GO:0000904        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003779        [VIEW IN EMBL-EBI]
GO:0005198        [VIEW IN EMBL-EBI]
GO:0005200        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0005885        [VIEW IN EMBL-EBI]
GO:0005938        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006897        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0007015        [VIEW IN EMBL-EBI]
GO:0008064        [VIEW IN EMBL-EBI]
GO:0008092        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010026        [VIEW IN EMBL-EBI]
GO:0010090        [VIEW IN EMBL-EBI]
GO:0010638        [VIEW IN EMBL-EBI]
GO:0015629        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030029        [VIEW IN EMBL-EBI]
GO:0030036        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030479        [VIEW IN EMBL-EBI]
GO:0030832        [VIEW IN EMBL-EBI]
GO:0030833        [VIEW IN EMBL-EBI]
GO:0030838        [VIEW IN EMBL-EBI]
GO:0030863        [VIEW IN EMBL-EBI]
GO:0030864        [VIEW IN EMBL-EBI]
GO:0030865        [VIEW IN EMBL-EBI]
GO:0030866        [VIEW IN EMBL-EBI]
GO:0031334        [VIEW IN EMBL-EBI]
GO:0032271        [VIEW IN EMBL-EBI]
GO:0032273        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032535        [VIEW IN EMBL-EBI]
GO:0032956        [VIEW IN EMBL-EBI]
GO:0032970        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0034314        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043254        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044089        [VIEW IN EMBL-EBI]
GO:0044396        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044448        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0045010        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051015        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051130        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051493        [VIEW IN EMBL-EBI]
GO:0051495        [VIEW IN EMBL-EBI]
GO:0061645        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090066        [VIEW IN EMBL-EBI]
GO:0090558        [VIEW IN EMBL-EBI]
GO:0090626        [VIEW IN EMBL-EBI]
GO:0097435        [VIEW IN EMBL-EBI]
GO:0098657        [VIEW IN EMBL-EBI]
GO:0099568        [VIEW IN EMBL-EBI]
GO:0110053        [VIEW IN EMBL-EBI]
GO:1902903        [VIEW IN EMBL-EBI]
GO:1902905        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAATTTAAGGAAAGGGCAGCTGGATAGGGTTAGGCTCTTCGCGGGCGTTTATGCATTTTCAAGTCTTGAAAAGTCAGTTGAGCTAGATTACCACTGGGTTGAGTTCAATGATGTTCGTTACCATGTTCAGGTATCAATGAAGAATCCGCATATTATATTGCTTTCAGTATCATTACCTACCCCGCCTCTGGAAACTGTTTTTGTTGCCGGACTTCCTTTTGGAGCCATAGAAGCTATCAAAGCAGCTTATGGTGTAATTGTGCAAATTCTTGATCCTCCAAGAGATGGCTTCAATCTAACATTGAAACTGAATTTGTCCAAACTTCCTCCAGATGAAGAGTACAGACAAGCTCTTTTGGTAAAGGTTGCATCTGTTAGGGAAGTAGTATTAGGTGCCCCTTTAAGGGTAATCCTAAAACATCTTGCTTCAAGGACTGTTGCTCCTGGTATTGATCGGCTTGTAGCTCTTGTGCATCGACCGAATGAGTCTTTTTTTCTTGTTCCTCAGGCAGAGAAGGTAACAGTGGTGTTTCCCATGAGATTCAAGGATTCAGTAGACACTGTTCTGGCAACCTCTTTTCTGCAGGAATTCATGGAATCAAGGCGTGCACCTGGGCTGAGTAATGCACCTCTTTGTACTTGGTCTCATTCTCCTCCGCTCGAACTAAATGGAGCAACTGATGATGCATTATCAGCCAATGCAGGATTTGTTACCTTCGGATTGGAAGAACTGAAAGGAGATGTGCCTCTGTATAAGAATCTTGGTGGTGAAAACAGAAGTACAGTTGAGGATTCACAGAGCCAACTAATATCAGCATACAGTAAAACTCAAGTGGACTCTATGGGTACAAAAGGAAAGTGTTCAGAGGGGTTCATGCATACTCGGATGCGGCGTCGTGTGGAGTCACTGATCCAGGCTCTTGATCGTGCCAAACCAGATCAGGAGAAGGCCAAGAAAACGTCAAATACAAGATCATTCAAACGGCTGAGCCTCAAGGACAGTAGGACGAATTCGAATTAA
Protein:  
MNLRKGQLDRVRLFAGVYAFSSLEKSVELDYHWVEFNDVRYHVQVSMKNPHIILLSVSLPTPPLETVFVAGLPFGAIEAIKAAYGVIVQILDPPRDGFNLTLKLNLSKLPPDEEYRQALLVKVASVREVVLGAPLRVILKHLASRTVAPGIDRLVALVHRPNESFFLVPQAEKVTVVFPMRFKDSVDTVLATSFLQEFMESRRAPGLSNAPLCTWSHSPPLELNGATDDALSANAGFVTFGLEELKGDVPLYKNLGGENRSTVEDSQSQLISAYSKTQVDSMGTKGKCSEGFMHTRMRRRVESLIQALDRAKPDQEKAKKTSNTRSFKRLSLKDSRTNSN